BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H06LP1|AL428456
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1094 1710 0.0
>3x_Contig1094
Length = 4859
Score = 1710 bits (862), Expect = 0.0
Identities = 884/888 (99%), Gaps = 3/888 (0%)
Strand = Plus / Plus
Query: 1 tgggatcacggntaatcaagagatatatggaagctatccaagataacgcatcaactacta 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 tgggatcacgg-taatcaagagatatatggaagctatccaagataacgcatcaactacta 1773
Query: 61 tcaaaagtatgttaagaaaaatggcaaaccatttcaataccacagaattctcaggtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 tcaaaagtatgttaagaaaaatggcaaaccatttcaataccacagaattctcaggtgaag 1833
Query: 121 atttgatggatgacggttcaacaatcaaattgaaagtcaatcttgacgttgagaatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 atttgatggatgacggttcaacaatcaaattgaaagtcaatcttgacgttgagaatgaag 1893
Query: 181 aatatacctttgatttcgaaggtacttctccacaaatatatggtaatctcaatgctcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 aatatacctttgatttcgaaggtacttctccacaaatatatggtaatctcaatgctcctg 1953
Query: 241 aggcgatcacaaattcggcaattctatactgtttgagatgtcttgttggtgaagatatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 aggcgatcacaaattcggcaattctatactgtttgagatgtcttgttggtgaagatatac 2013
Query: 301 ctttgaaccaaggttgtttgaaaccgcttacaataaaaattcctaagggatccattcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 ctttgaaccaaggttgtttgaaaccgcttacaataaaaattcctaagggatccattcttt 2073
Query: 361 cacctaccaaagggatggctgttgttggtggtaatgtgttgacttcgcaaagagttaccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 cacctaccaaagggatggctgttgttggtggtaatgtgttgacttcgcaaagagttaccg 2133
Query: 421 atgtagttctcaaaactttccaagtcatggctgattcccaaggtgattgtwacaatttca 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2134 atgtagttctcaaaactttccaagtcatggctgattcccaaggtgattgtaacaatttca 2193
Query: 481 cattcggaacaggtggtaaagatcctataactggtgagaccaaagatggattcggctact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 cattcggaacaggtggtaaagatcctataactggtgagaccaaagatggattcggctact 2253
Query: 541 acgagacaatttgtggaggtcatggtgcaggatgtgactcttggagaggcaatggttgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 acgagacaatttgtggaggtcatggtgcaggatgtgactcttggagaggcaatggttgga 2313
Query: 601 atggagctgacgcggtccacacgaatatgaccaatactagaatcactgatgtcgaaattt 660
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 atggag-tgacgcggtccacacgaatatgaccaatactagaatcactgatgtcgaaattt 2372
Query: 661 tcgagagacgctaccctgttatccttaatgaattctccattagacaaaattctgggggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2373 tcgagagacgctaccctgttatccttaatgaattctccattagacaaaattctgggggta 2432
Query: 721 aaggtaaatacaaaggtggtaatggtattgtaagagatattacgttccgtaaag-aagtt 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2433 aaggtaaatacaaaggtggtaatggtattgtaagagatattacgttccgtaaagaaagtt 2492
Query: 780 caggcatcaattctttcagaacgtcgtgttattgctccacatggtattgctggtggtggt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2493 caggcatcaattctttcagaacgtcgtgttattgctccacatggtattgctggtggtggt 2552
Query: 840 gatggtgcgcgcggtatgaacatttgggtcagacacgaaaccaattcg 887
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2553 gatggtgcgcgcggtatgaacatttgggtcagacacgaaaccaattcg 2600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6535
Number of Sequences: 1807
Number of extensions: 6535
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)